MLOC_46578 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains32.63273.689472.30220
LEAShoots from the seedlings (10 cm shoot stage)66.217681.416655.6040
INF1Young developing inflorescences (5mm)145.193123.82114.1490
INF2Developing inflorescences (1-1.5 cm)145.57169.23118.5270
ROORoots from the seedlings (10 cm shoot stage)45.152666.015962.25340
NODDeveloping tillers at six leaf stage, 3rd internode23.491725.473317.780
CAR5Developing grain, bracts removed (5 DPA)100.31288.9143104.1080
CAR15Developing grain, bracts removed (15 DPA)46.236949.798539.88640



CDS Structure of MLOC_46578






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK361745
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK361745CUST_20419_PI427708080NoneNoneNone
MLOC_27773.1NoneAvailableAvailablecontig_186163 (Mapped)
MLOC_29160.1NoneAvailableNonecontig_1980514 (Not mapped)
MLOC_46578.2NoneAvailableNonecontig_292511 (Not mapped)
MLOC_48688.2NoneAvailableNonecontig_328031 (Mapped)
MLOC_69437.1NoneAvailableNonecontig_56423 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----