- Predicted Gene MLOC_46575
MLOC_46575 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.315606 | 0.544666 | 0.433762 | 0.8513 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.38247 | 0.17222 | 0.411687 | 0.907142 |
| INF1 | Young developing inflorescences (5mm) | 1.81379 | 0.657647 | 1.66893 | 1.40075 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.41255 | 1.82231 | 1.56665 | 1.98171 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.878043 | 0.833162 | 1.29904 | 1.54609 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.765255 | 1.85623 | 2.96363 | 9.42482 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.757879 | 1.76548 | 1.48477 | 1.57934 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.40528 | 0.412562 | 0.450776 | 1.42685 |
CDS Structure of MLOC_46575
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_46575.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 | None | - | - | - | - | - |
| TAIR PP10 |
AT1G43890.3 |
-2 |
3e-11 |
61 |
30/34 (88%) |
| Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C1, RAB18 | RAB GTPASE HOMOLOG B18 | chr1:16646934-16648395 FORWARD LENGTH=212 |