MLOC_46574 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.9574560.7106570.6137760.712493
LEAShoots from the seedlings (10 cm shoot stage)0.2985640.9186850.9082530.540976
INF1Young developing inflorescences (5mm)1.876151.995492.257651.41644
INF2Developing inflorescences (1-1.5 cm)3.538181.980613.06782.54063
ROORoots from the seedlings (10 cm shoot stage)0.4792191.166071.121541.05176
NODDeveloping tillers at six leaf stage, 3rd internode0.3709221.729141.333114.16956
CAR5Developing grain, bracts removed (5 DPA)1.829132.935231.020441.61616
CAR15Developing grain, bracts removed (15 DPA)1.402281.17811.030642.62761



CDS Structure of MLOC_46574






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK249100.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249100.1CUST_13935_PI427708083NoneNoneNone
MLOC_27223.1NoneAvailableNonecontig_1815139 (Not mapped)
MLOC_30099.1NoneAvailableNonecontig_2064810 (Mapped)
MLOC_35688.2NoneAvailableNonecontig_251641 (Mapped)
MLOC_46574.2NoneAvailableAvailablecontig_292439 (Not mapped)
MLOC_8251.1NoneAvailableNonecontig_1417169 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----