- Predicted Gene MLOC_46466
- Gene IDMLOC_46466
- Source Contig contig_290832
MLOC_46466 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|---|
| There are no FPKM-by-treatment values calculated for this gene. | ![]() |
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|---|---|---|---|---|
| EMB | 4-day embryos dissected from germinating grains | 0 | 1.32961 | 1.04294 | 0 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.21548 | 0 | 2.01143 | 0 |
| INF1 | Young developing inflorescences (5mm) | 0.670978 | 0 | 0.849429 | 0 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.38461 | 0.871474 | 0.646688 | 0 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.69967 | 0 | 0 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.662379 | 0.854169 | 1.05608 | 0 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.596186 | 0.530238 | 1.3707 | 0 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0 | 0 |
CDS Structure of MLOC_46466

Members of Gene Cluster
This cluster has a confidence assignment of High Confidence.The gene has a transcript that is part of a cluster represented by AK249301.1
| Cluster member | Probe ID | FPKM by replicate | FPKM by treatment | Source Contig |
|---|---|---|---|---|
| AK249301.1 | CUST_23254_PI427708080 | None | None | None |
| MLOC_13145.1 | None | Available | None | contig_156493 (Mapped) |
| MLOC_1912.1 | None | Available | None | contig_1170319 (Not mapped) |
| MLOC_2544.1 | None | Available | None | contig_1226734 (Not mapped) |
| MLOC_2887.1 | None | Available | None | contig_1257715 (Not mapped) |
| MLOC_29047.1 | None | Available | None | contig_1969596 (Not mapped) |
| MLOC_30776.1 | None | Available | None | contig_21252 (Not mapped) |
| MLOC_33489.1 | None | Available | None | contig_237800 (Not mapped) |
| MLOC_35846.1 | None | Available | None | contig_252373 (Mapped) |
| MLOC_41311.1 | None | Available | None | contig_2582226 (Not mapped) |
| MLOC_42452.1 | None | Available | None | contig_2645397 (Not mapped) |
| MLOC_46466.1 | None | Available | None | contig_290832 (Mapped) |
| MLOC_47434.1 | None | Available | None | contig_306050 (Mapped) |
| MLOC_48547.1 | None | Available | Available | contig_325745 (Not mapped) |
| MLOC_59622.1 | None | Available | None | contig_437690 (Mapped) |
| MLOC_80103.1 | None | Available | None | contig_886570 (Not mapped) |
| MLOC_955.1 | None | Available | None | contig_1079535 (Mapped) |
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|---|---|---|---|---|---|
| Rice PP6 | None | - | - | - | - | - |
| TAIR PP10 | None | - | - | - | - | - |
