MLOC_46455 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.13001400.179308
LEAShoots from the seedlings (10 cm shoot stage)0.48013000.509259
INF1Young developing inflorescences (5mm)0.2625250.4000120.824630.317067
INF2Developing inflorescences (1-1.5 cm)0.2906480.4486920.1257910.328948
ROORoots from the seedlings (10 cm shoot stage)00.13316700.476916
NODDeveloping tillers at six leaf stage, 3rd internode00.1058680.2133820.530873
CAR5Developing grain, bracts removed (5 DPA)0.4572270.6241530.131020.376162
CAR15Developing grain, bracts removed (15 DPA)0001.10247



CDS Structure of MLOC_46455






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_46455.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_46455.1CUST_12532_PI427708083AvailableAvailablecontig_290651 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g14610.1 +1 3e-51 172 93/123 (76%) 13103.m01710 protein HVA22, putative, expressed
TAIR PP10 AT1G75700.1 +1 2e-40 138 68/122 (56%) | Symbols: HVA22G | HVA22-like protein G | chr1:28423956-28424931 FORWARD LENGTH=177