MLOC_46454 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.9173212.934214.0297.99192
LEAShoots from the seedlings (10 cm shoot stage)14.61217.673513.12088.76155
INF1Young developing inflorescences (5mm)8.377616.8047613.44284.938
INF2Developing inflorescences (1-1.5 cm)6.924284.685257.443824.91832
ROORoots from the seedlings (10 cm shoot stage)9.804039.724469.4787.84467
NODDeveloping tillers at six leaf stage, 3rd internode11.82298.7602711.985621.2745
CAR5Developing grain, bracts removed (5 DPA)5.331437.23036.136264.12736
CAR15Developing grain, bracts removed (15 DPA)1.901962.076241.636042.98145



CDS Structure of MLOC_46454






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_46454.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_46454.1CUST_12531_PI427708083AvailableAvailablecontig_290637 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g49270.1 -3 3e-25 106 52/88 (59%) 13104.m05029 protein tRNA-splicing endonuclease positive effector-related, putative, expressed
TAIR PP10None-----