MLOC_46423 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.07749.8737913.5690
LEAShoots from the seedlings (10 cm shoot stage)9.155677.2775216.54060
INF1Young developing inflorescences (5mm)14.153812.315316.69510
INF2Developing inflorescences (1-1.5 cm)19.98321.151121.37640
ROORoots from the seedlings (10 cm shoot stage)17.744111.30359.182680
NODDeveloping tillers at six leaf stage, 3rd internode15.577621.00628.08520
CAR5Developing grain, bracts removed (5 DPA)9.943689.8201111.78060
CAR15Developing grain, bracts removed (15 DPA)7.3146514.46268.343740



CDS Structure of MLOC_46423






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK366111
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366111CUST_21235_PI427708080NoneNoneNone
MLOC_10864.1NoneAvailableNonecontig_155995 (Mapped)
MLOC_25248.1NoneAvailableNonecontig_1680006 (Not mapped)
MLOC_2630.1NoneAvailableNonecontig_1234930 (Not mapped)
MLOC_28342.1NoneAvailableNonecontig_190993 (Not mapped)
MLOC_30676.1NoneAvailableNonecontig_2117877 (Not mapped)
MLOC_30856.1NoneAvailableNonecontig_2133488 (Not mapped)
MLOC_40829.1NoneAvailableNonecontig_256529 (Mapped)
MLOC_46423.1NoneAvailableNonecontig_29007 (Not mapped)
MLOC_49059.1NoneAvailableNonecontig_33468 (Not mapped)
MLOC_49267.1NoneAvailableNonecontig_338798 (Mapped)
MLOC_52892.1NoneAvailableNonecontig_378873 (Not mapped)
MLOC_54702.1NoneAvailableNonecontig_393235 (Mapped)
MLOC_70914.1NoneAvailableAvailablecontig_58773 (Mapped)
MLOC_78399.1NoneAvailableNonecontig_800647 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----