- Predicted Gene MLOC_46351
MLOC_46351 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_46351_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_46351_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.45146 | 2.21175 | 2.27029 | 1.32766 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.43987 | 3.7895 | 2.13068 | 1.8895 |
INF1 | Young developing inflorescences (5mm) | 1.84458 | 1.39944 | 5.34489 | 1.41077 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.95493 | 3.51622 | 1.65944 | 2.5098 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.78086 | 2.1875 | 1.40556 | 2.36445 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.4549 | 4.30068 | 8.19228 | 11.4697 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.69813 | 2.28522 | 2.36406 | 1.54434 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.992885 | 0.808762 | 0.294002 | 1.40234 |
CDS Structure of MLOC_46351
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_46351.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g38300.2 |
+2 |
5e-20 |
86 |
42/52 (81%) |
13102.m04213 protein SNF7 domain containing protein, putative, expressed |
TAIR PP10 |
AT5G09260.1 |
+2 |
5e-19 |
82 |
39/52 (75%) |
| Symbols: VPS20.2 | vacuolar protein sorting-associated protein 20.2 | chr5:2876797-2878355 FORWARD LENGTH=216 |