MLOC_46342 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.176422.672956.828980
LEAShoots from the seedlings (10 cm shoot stage)6.147093.3026300
INF1Young developing inflorescences (5mm)4.12079.320442.11010
INF2Developing inflorescences (1-1.5 cm)18.604914.188313.47710
ROORoots from the seedlings (10 cm shoot stage)6.911939.171585.944830
NODDeveloping tillers at six leaf stage, 3rd internode10.23187.8945510.18850
CAR5Developing grain, bracts removed (5 DPA)6.816275.450837.543010
CAR15Developing grain, bracts removed (15 DPA)5.923264.509025.261450



CDS Structure of MLOC_46342






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK353643
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK353643CUST_23602_PI427708080NoneNoneNone
MLOC_22739.1NoneAvailableAvailablecontig_1611193 (Mapped)
MLOC_24876.1NoneAvailableNonecontig_165957 (Mapped)
MLOC_3495.1NoneAvailableNonecontig_131217 (Not mapped)
MLOC_46342.1NoneAvailableNonecontig_288946 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----