MLOC_4631 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 4.91885 | 5.1936 | 5.016 | 5.00598 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 4.62682 | 3.35067 | 2.14582 | 2.9353 |
INF1 | Young developing inflorescences (5mm) | 6.85833 | 6.87932 | 7.32516 | 5.68007 |
INF2 | Developing inflorescences (1-1.5 cm) | 3.88196 | 4.94543 | 5.3302 | 4.9129 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.63557 | 7.642 | 6.59795 | 8.34591 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.440937 | 0.636947 | 1.36658 | 2.64198 |
CAR5 | Developing grain, bracts removed (5 DPA) | 13.7061 | 13.8592 | 13.79 | 13.0358 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.5061 | 4.14704 | 3.61552 | 9.24723 |
CDS Structure of MLOC_4631
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4631.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g51100.1 |
+3 |
0.0 |
603 |
340/385 (88%) |
13104.m05197 protein COBW domain containing protein, putative, expressed |
TAIR PP10 |
AT1G80480.1 |
+3 |
9e-127 |
383 |
216/359 (60%) |
| Symbols: PTAC17 | plastid transcriptionally active 17 | chr1:30258272-30260570 REVERSE LENGTH=444 |