MLOC_46285 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains81.773270.543775.446467.9895
LEAShoots from the seedlings (10 cm shoot stage)28.828718.562310.07315.0539
INF1Young developing inflorescences (5mm)7.102787.727368.735426.45761
INF2Developing inflorescences (1-1.5 cm)5.584674.918963.406174.92417
ROORoots from the seedlings (10 cm shoot stage)317.557227.965238.707248.52
NODDeveloping tillers at six leaf stage, 3rd internode332.713307.924275.026795.094
CAR5Developing grain, bracts removed (5 DPA)4.817855.66254.542714.55121
CAR15Developing grain, bracts removed (15 DPA)0.6216610.652190.5479511.48092



CDS Structure of MLOC_46285






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_46285.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK360314NoneNoneNoneNone
MLOC_46285.1CUST_2733_PI427708080AvailableAvailablecontig_288072 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g47700.1 +3 6e-36 128 57/72 (79%) 13105.m05055 protein LTPL152 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
TAIR PP10 AT1G48750.1 +3 2e-24 97 38/71 (54%) Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | chr1:18036019-18036303 FORWARD LENGTH=94