MLOC_46271 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.449553.769263.699210
LEAShoots from the seedlings (10 cm shoot stage)4.905034.920974.106530
INF1Young developing inflorescences (5mm)5.028047.107575.175420
INF2Developing inflorescences (1-1.5 cm)6.687987.216195.08530
ROORoots from the seedlings (10 cm shoot stage)3.630141.834566.144090
NODDeveloping tillers at six leaf stage, 3rd internode5.176756.732137.392460
CAR5Developing grain, bracts removed (5 DPA)4.211826.38965.361250
CAR15Developing grain, bracts removed (15 DPA)1.308930.6733090.4876070



CDS Structure of MLOC_46271






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK248932.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248932.1NoneNoneNoneNone
MLOC_24345.1NoneAvailableAvailablecontig_164306 (Mapped)
MLOC_28154.1NoneAvailableNonecontig_1895847 (Mapped)
MLOC_3006.1NoneAvailableNonecontig_126998 (Mapped)
MLOC_32115.1NoneAvailableNonecontig_2253409 (Not mapped)
MLOC_33270.1NoneAvailableNonecontig_23588 (Not mapped)
MLOC_35409.1NoneAvailableNonecontig_2482301 (Not mapped)
MLOC_41906.1NoneAvailableNonecontig_2613025 (Not mapped)
MLOC_46271.1NoneAvailableNonecontig_287850 (Mapped)
MLOC_46358.3NoneAvailableNonecontig_289080 (Mapped)
MLOC_47425.1NoneAvailableNonecontig_305974 (Not mapped)
MLOC_48300.1NoneAvailableNonecontig_320894 (Not mapped)
MLOC_76694.1NoneAvailableNonecontig_724178 (Not mapped)
MLOC_79350.1NoneAvailableNonecontig_84556 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----