- Predicted Gene MLOC_46227
MLOC_46227 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 10.2138 | 17.1307 | 15.1715 | 13.3805 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 10.3742 | 6.68691 | 10.2105 | 8.15343 |
| INF1 | Young developing inflorescences (5mm) | 8.72503 | 8.89353 | 8.81535 | 6.7204 |
| INF2 | Developing inflorescences (1-1.5 cm) | 9.29438 | 6.56813 | 5.30993 | 7.58138 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 13.6569 | 8.69024 | 13.8403 | 12.8201 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 11.5498 | 14.4692 | 8.70006 | 42.397 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.49654 | 5.5628 | 5.03046 | 4.77415 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.40745 | 2.3729 | 2.75944 | 6.02221 |
CDS Structure of MLOC_46227
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_46227.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g62720.3 |
-1 |
7e-31 |
113 |
56/59 (95%) |
13103.m12898 protein exosome complex exonuclease, putative, expressed |
| TAIR PP10 |
AT4G27490.1 |
-1 |
2e-22 |
92 |
44/60 (73%) |
3-5-exoribonuclease family protein | chr4:13739961-13741647 FORWARD LENGTH=256 |