- Predicted Gene MLOC_46197
MLOC_46197 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0 | 0.211478 | 0.651378 | 0.302793 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.54325 | 0.397808 | 0.655057 | 0.677813 |
| INF1 | Young developing inflorescences (5mm) | 0.210647 | 0.833172 | 1.30965 | 0.439261 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.622784 | 0.582218 | 0.410846 | 0.516072 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.20749 | 1.11948 | 1.45339 | 1.04427 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.961386 | 1.46821 | 2.00514 | 3.71597 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.584882 | 0.529525 | 0.222744 | 0.358939 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.664128 | 0.229327 | 0.327374 | 0.903769 |
CDS Structure of MLOC_46197
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_46197.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g05280.1 |
-2 |
6e-15 |
71 |
30/41 (73%) |
13103.m00555 protein ras-related protein, putative, expressed |
| TAIR PP10 |
AT1G43890.3 |
-2 |
1e-19 |
83 |
39/41 (95%) |
| Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C1, RAB18 | RAB GTPASE HOMOLOG B18 | chr1:16646934-16648395 FORWARD LENGTH=212 |