MLOC_46169 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains001.03440
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0.334910.68282300
INF2Developing inflorescences (1-1.5 cm)0.7777860.7411631.400510
ROORoots from the seedlings (10 cm shoot stage)001.149170
NODDeveloping tillers at six leaf stage, 3rd internode00.5448670.1001640
CAR5Developing grain, bracts removed (5 DPA)0.32803000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_46169






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK373522
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373522CUST_22509_PI427708080NoneNoneNone
MLOC_13587.1NoneAvailableAvailablecontig_1566005 (Mapped)
MLOC_25969.1NoneAvailableNonecontig_1724874 (Not mapped)
MLOC_31781.1NoneAvailableNonecontig_222233 (Not mapped)
MLOC_35819.1NoneAvailableNonecontig_2522914 (Mapped)
MLOC_46169.1NoneAvailableNonecontig_286404 (Not mapped)
MLOC_78470.1NoneAvailableNonecontig_804035 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----