MLOC_46157 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.408111.78179.5437914.1639
LEAShoots from the seedlings (10 cm shoot stage)17.06697.91157.0529410.3534
INF1Young developing inflorescences (5mm)13.342713.345814.632914.1519
INF2Developing inflorescences (1-1.5 cm)18.917417.267516.248823.5421
ROORoots from the seedlings (10 cm shoot stage)14.762613.214419.438920.8038
NODDeveloping tillers at six leaf stage, 3rd internode28.68940.899549.7521174.165
CAR5Developing grain, bracts removed (5 DPA)14.299718.079714.017219.4245
CAR15Developing grain, bracts removed (15 DPA)6.048437.900445.4174518.8303



CDS Structure of MLOC_46157






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_46157.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_46157.1CUST_6503_PI427708083AvailableAvailablecontig_286195 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g05280.1 -3 2e-51 169 93/102 (91%) 13105.m00547 protein zinc finger family protein, putative, expressed
TAIR PP10 AT3G47990.1 -3 4e-42 144 77/103 (75%) | Symbols: SIS3 | SUGAR-INSENSITIVE 3 | chr3:17713367-17716051 REVERSE LENGTH=358