MLOC_46147 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.559770.904151.30841.07429
LEAShoots from the seedlings (10 cm shoot stage)2.268511.34622.755481.60779
INF1Young developing inflorescences (5mm)2.689793.418333.563182.44936
INF2Developing inflorescences (1-1.5 cm)4.179654.110844.975994.17678
ROORoots from the seedlings (10 cm shoot stage)0.6674780.8247351.244630.832684
NODDeveloping tillers at six leaf stage, 3rd internode1.23853.362486.582219.72
CAR5Developing grain, bracts removed (5 DPA)1.752532.11921.490031.52578
CAR15Developing grain, bracts removed (15 DPA)1.226711.082131.125062.44984



CDS Structure of MLOC_46147






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_46147.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_46147.1CUST_12370_PI427708080AvailableAvailablecontig_286088 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g51590.1 -3 7e-22 92 52/170 (31%) 13104.m05266 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----