- Predicted Gene MLOC_46147
MLOC_46147 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 1.55977 | 0.90415 | 1.3084 | 1.07429 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.26851 | 1.3462 | 2.75548 | 1.60779 |
INF1 | Young developing inflorescences (5mm) | 2.68979 | 3.41833 | 3.56318 | 2.44936 |
INF2 | Developing inflorescences (1-1.5 cm) | 4.17965 | 4.11084 | 4.97599 | 4.17678 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.667478 | 0.824735 | 1.24463 | 0.832684 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.2385 | 3.36248 | 6.58221 | 9.72 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.75253 | 2.1192 | 1.49003 | 1.52578 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.22671 | 1.08213 | 1.12506 | 2.44984 |
CDS Structure of MLOC_46147
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_46147.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g51590.1 |
-3 |
7e-22 |
92 |
52/170 (31%) |
13104.m05266 protein retrotransposon protein, putative, unclassified |
TAIR PP10 | None | - | - | - | - | - |