MLOC_46134 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.799046.898366.372925.44294
LEAShoots from the seedlings (10 cm shoot stage)7.72668.605646.379956.36739
INF1Young developing inflorescences (5mm)8.025069.8813812.3887.11286
INF2Developing inflorescences (1-1.5 cm)23.889917.059115.360319.2458
ROORoots from the seedlings (10 cm shoot stage)1.706294.5366.043814.94197
NODDeveloping tillers at six leaf stage, 3rd internode4.355296.493316.3376622.3208
CAR5Developing grain, bracts removed (5 DPA)10.633212.148512.523310.3756
CAR15Developing grain, bracts removed (15 DPA)5.507065.704875.2250411.0699



CDS Structure of MLOC_46134






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_46134.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_46134.1CUST_12368_PI427708080AvailableAvailablecontig_285894 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g26510.1 +1 2e-28 117 70/189 (37%) 13102.m02870 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----