- Predicted Gene MLOC_46083
MLOC_46083 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 11.6115 | 29.8306 | 24.4612 | 24.9459 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 26.1614 | 18.9022 | 17.2993 | 18.8191 |
| INF1 | Young developing inflorescences (5mm) | 69.4176 | 66.1512 | 58.3213 | 56.146 |
| INF2 | Developing inflorescences (1-1.5 cm) | 85.1554 | 78.4703 | 64.8355 | 86.1752 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 11.6715 | 27.927 | 19.2647 | 32.0467 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 7.09857 | 10.2416 | 10.7594 | 36.7123 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 44.3223 | 37.0009 | 41.1657 | 39.9396 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 26.0688 | 22.5087 | 19.6666 | 53.8899 |
CDS Structure of MLOC_46083
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_46083.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g01740.1 |
-2 |
0.0 |
3786 |
1989/2179 (91%) |
13102.m00099 protein U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed |
| TAIR PP10 |
AT1G20960.2 |
-2 |
0.0 |
3058 |
1613/2182 (74%) |
| Symbols: emb1507 | U5 small nuclear ribonucleoprotein helicase, putative | chr1:7302591-7309914 REVERSE LENGTH=2171 |