MLOC_46031 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains55.138438.560839.322835.5231
LEAShoots from the seedlings (10 cm shoot stage)70.284585.409108.63759.4451
INF1Young developing inflorescences (5mm)23.030331.096426.40316.7811
INF2Developing inflorescences (1-1.5 cm)22.028918.59817.782917.0138
ROORoots from the seedlings (10 cm shoot stage)102.68783.137879.87979.7993
NODDeveloping tillers at six leaf stage, 3rd internode84.639384.272445.6488198.07
CAR5Developing grain, bracts removed (5 DPA)42.926847.984651.18832.9319
CAR15Developing grain, bracts removed (15 DPA)19.657122.118623.344634.4179



CDS Structure of MLOC_46031






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_46031.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_46031.1CUST_12512_PI427708083AvailableAvailablecontig_284527 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g61130.1 +3 7e-32 120 55/69 (80%) 13103.m06718 protein phosphoesterase family protein, putative, expressed
TAIR PP10 AT1G07230.1 +3 7e-27 106 47/69 (68%) | Symbols: NPC1 | non-specific phospholipase C1 | chr1:2220509-2222778 REVERSE LENGTH=533