MLOC_46026 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.7541312.062413.041510.0825
LEAShoots from the seedlings (10 cm shoot stage)6.1780710.971313.16939.65423
INF1Young developing inflorescences (5mm)12.490611.365517.225511.8415
INF2Developing inflorescences (1-1.5 cm)8.386616.4039712.9749.74272
ROORoots from the seedlings (10 cm shoot stage)2.4194610.758212.14312.685
NODDeveloping tillers at six leaf stage, 3rd internode3.845755.620588.3748723.5027
CAR5Developing grain, bracts removed (5 DPA)16.213310.56024.036310.3432
CAR15Developing grain, bracts removed (15 DPA)7.209412.469953.6729811.8747



CDS Structure of MLOC_46026






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_46026.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_46026.1CUST_6487_PI427708083AvailableAvailablecontig_28445 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g47820.2 -3 1e-19 82 37/43 (86%) 13107.m05108 protein acyl-CoA dehydrogenase family member 10, putative, expressed
TAIR PP10None-----