MLOC_4597 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 45.6672 | 53.7977 | 53.2338 | 46.2186 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 30.7654 | 6.09241 | 9.15076 | 12.8946 |
| INF1 | Young developing inflorescences (5mm) | 13.2821 | 12.0659 | 8.17048 | 8.86455 |
| INF2 | Developing inflorescences (1-1.5 cm) | 14.4659 | 18.1297 | 19.8799 | 17.0826 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 11.9095 | 16.9391 | 16.4191 | 16.467 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 11.0955 | 16.9749 | 0.118243 | 39.4881 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 15.9466 | 19.3532 | 21.8624 | 16.3095 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.39148 | 1.59152 | 2.6366 | 4.56828 |
CDS Structure of MLOC_4597
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4597.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g39610.1 |
-2 |
0.0 |
1209 |
598/705 (85%) |
13104.m03843 protein glycerophosphoryl diester phosphodiesterase family protein, putative, expressed |
| TAIR PP10 |
AT5G55480.1 |
-2 |
0.0 |
716 |
361/697 (52%) |
| Symbols: SVL1 | SHV3-like 1 | chr5:22474277-22477819 FORWARD LENGTH=766 |
