MLOC_45960 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.784193.880511.660090
LEAShoots from the seedlings (10 cm shoot stage)8.110343.296231.03010
INF1Young developing inflorescences (5mm)8.694210.530818.27510
INF2Developing inflorescences (1-1.5 cm)16.469313.680521.26810
ROORoots from the seedlings (10 cm shoot stage)2.444581.309630.8230630
NODDeveloping tillers at six leaf stage, 3rd internode2.955933.014343.985690
CAR5Developing grain, bracts removed (5 DPA)6.518344.287458.584830
CAR15Developing grain, bracts removed (15 DPA)5.499882.318716.40170



CDS Structure of MLOC_45960






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK368446
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK368446NoneNoneNoneNone
MLOC_28855.1NoneAvailableNonecontig_195311 (Mapped)
MLOC_32455.1NoneAvailableNonecontig_228766 (Mapped)
MLOC_33806.1NoneAvailableNonecontig_24044 (Not mapped)
MLOC_34077.1NoneAvailableNonecontig_2423037 (Not mapped)
MLOC_41526.1NoneAvailableNonecontig_2592888 (Mapped)
MLOC_45960.1NoneAvailableNonecontig_283609 (Mapped)
MLOC_48739.1NoneAvailableAvailablecontig_328847 (Not mapped)
MLOC_54164.1NoneAvailableNonecontig_389339 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----