MLOC_45952 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains329.565214.543204.352273.295
LEAShoots from the seedlings (10 cm shoot stage)157.022102.516122.755121.76
INF1Young developing inflorescences (5mm)323.635327.555321.333310.365
INF2Developing inflorescences (1-1.5 cm)264.07300.557261.97344.523
ROORoots from the seedlings (10 cm shoot stage)226.748226.609180.858312.684
NODDeveloping tillers at six leaf stage, 3rd internode37.124955.173884.5485217.805
CAR5Developing grain, bracts removed (5 DPA)375.331367.351372.404413.261
CAR15Developing grain, bracts removed (15 DPA)193.101162.353130.168427.532



CDS Structure of MLOC_45952






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK356124
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356124CUST_19619_PI427708080NoneNoneNone
MLOC_22817.1NoneAvailableNonecontig_161246 (Mapped)
MLOC_35143.1NoneAvailableNonecontig_24583 (Not mapped)
MLOC_35745.1NoneAvailableNonecontig_2520748 (Not mapped)
MLOC_45952.1NoneAvailableAvailablecontig_283546 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----