MLOC_4594 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1249350.298330.3486890.2586
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.05859610.0286250.07081160.0673054
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0.07515910.03402660.00966010.0801038
CAR5Developing grain, bracts removed (5 DPA)12.838711.773312.639112.1398
CAR15Developing grain, bracts removed (15 DPA)0.3499340.1573980.0772830.535336



CDS Structure of MLOC_4594






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_4594.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_4594.1CUST_12356_PI427708080AvailableAvailablecontig_135299 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g06520.1 +3 0.0 543 274/368 (74%) 13106.m00673 protein GDSL-like lipase/acylhydrolase, putative, expressed
TAIR PP10 AT4G01130.1 +3 1e-143 421 215/371 (58%) GDSL-like Lipase/Acylhydrolase superfamily protein | chr4:485868-488007 FORWARD LENGTH=382