MLOC_45904 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.821812.089513.20529.58197
LEAShoots from the seedlings (10 cm shoot stage)28.192432.297826.23118.1182
INF1Young developing inflorescences (5mm)17.263620.643620.821411.0514
INF2Developing inflorescences (1-1.5 cm)21.831619.783424.871619.3264
ROORoots from the seedlings (10 cm shoot stage)29.207416.276715.434216.2613
NODDeveloping tillers at six leaf stage, 3rd internode27.567212.842414.927733.6645
CAR5Developing grain, bracts removed (5 DPA)16.293914.187911.084810.3634
CAR15Developing grain, bracts removed (15 DPA)13.53769.5354810.938618.7786



CDS Structure of MLOC_45904






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_45904.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_45904.1CUST_12508_PI427708083AvailableAvailablecontig_282929 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g60920.1 +2 5e-18 77 37/38 (97%) 13103.m06694 protein Methyltransferase small domain containing protein, expressed
TAIR PP10None-----