MLOC_45901 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.08730731.845121.285791.47943
LEAShoots from the seedlings (10 cm shoot stage)2.286491.663090.9847071.5132
INF1Young developing inflorescences (5mm)5.318993.100954.910474.00293
INF2Developing inflorescences (1-1.5 cm)12.11797.533468.1902310.961
ROORoots from the seedlings (10 cm shoot stage)0.3025491.294561.325131.61598
NODDeveloping tillers at six leaf stage, 3rd internode0.8927962.918374.8715811.2062
CAR5Developing grain, bracts removed (5 DPA)1.758321.627132.381712.12262
CAR15Developing grain, bracts removed (15 DPA)1.416992.266352.576855.21072



CDS Structure of MLOC_45901






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_45901.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_45901.1CUST_12353_PI427708080AvailableAvailablecontig_282907 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g13130.3 -3 4e-37 135 73/127 (57%) 13102.m01456 protein KH domain-containing protein, putative, expressed
TAIR PP10 AT2G25970.1 -3 2e-24 97 62/129 (48%) KH domain-containing protein | chr2:11071844-11075604 REVERSE LENGTH=632