MLOC_45892 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.846931.078022.10551.74534
LEAShoots from the seedlings (10 cm shoot stage)1.661920.9978721.30341.31449
INF1Young developing inflorescences (5mm)1.446711.337211.867731.44551
INF2Developing inflorescences (1-1.5 cm)1.252781.303721.887551.73883
ROORoots from the seedlings (10 cm shoot stage)0.5329951.371032.730761.95804
NODDeveloping tillers at six leaf stage, 3rd internode2.485951.48272.392266.49449
CAR5Developing grain, bracts removed (5 DPA)1.970341.970072.481722.28631
CAR15Developing grain, bracts removed (15 DPA)0.6226240.2202750.30941.01393



CDS Structure of MLOC_45892






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_45892.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_45892.1CUST_6458_PI427708083AvailableAvailablecontig_282793 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g57420.1 -1 3e-11 61 51/60 (85%) 13104.m06007 protein reticulon domain containing protein, putative, expressed
TAIR PP10None-----