MLOC_4586 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 25.1685 | 24.8167 | 22.7671 | 26.3701 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 12.1227 | 5.99793 | 6.9914 | 7.58288 |
| INF1 | Young developing inflorescences (5mm) | 28.1433 | 25.595 | 25.0976 | 23.4835 |
| INF2 | Developing inflorescences (1-1.5 cm) | 24.8855 | 23.8092 | 24.922 | 28.4185 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 16.5725 | 18.5666 | 17.5373 | 24.1238 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.515125 | 0.401611 | 1.2041 | 1.97716 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 22.3791 | 20.4925 | 23.0632 | 22.9709 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 6.42308 | 5.50736 | 5.10766 | 14.0827 |
CDS Structure of MLOC_4586
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4586.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g73950.2 |
-3 |
1e-84 |
283 |
183/570 (32%) |
13101.m08077 protein PPR repeat containing protein, expressed |
| TAIR PP10 |
AT3G02490.1 |
-3 |
6e-100 |
325 |
186/556 (33%) |
Pentatricopeptide repeat (PPR) superfamily protein | chr3:513607-515604 FORWARD LENGTH=665 |
