MLOC_4585 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.04348310.1629920.2212510.137284
LEAShoots from the seedlings (10 cm shoot stage)0.1136420.1146190.03136570.0736391
INF1Young developing inflorescences (5mm)0.0210720.02108870.02649140.0178383
INF2Developing inflorescences (1-1.5 cm)0.0509340.01565420.02366740.0324282
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0.0588480.01563460.04256280.0698139
CAR5Developing grain, bracts removed (5 DPA)000.02307630.0178117
CAR15Developing grain, bracts removed (15 DPA)0.04677640.04779930.03456810.100082



CDS Structure of MLOC_4585






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_4585.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373096NoneNoneNoneNone
MLOC_4585.2CUST_264_PI427708080AvailableAvailablecontig_135294 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g10630.1 +3 0.0 874 433/526 (82%) 13102.m01185 protein GRAM and C2 domains containing protein, putative, expressed
TAIR PP10 AT1G03370.1 +3 0.0 598 296/527 (56%) C2 calcium/lipid-binding and GRAM domain containing protein | chr1:830968-834996 FORWARD LENGTH=1020