MLOC_4582 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 10.4429 | 9.92164 | 11.5493 | 11.1568 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.758637 | 0.275751 | 0.583085 | 0.496942 |
| INF1 | Young developing inflorescences (5mm) | 0.592521 | 0.72051 | 0.608157 | 0.596622 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.297855 | 0.394281 | 0.40509 | 0.453371 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 25.1384 | 15.2694 | 25.626 | 22.6908 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.37019 | 5.90365 | 0.824286 | 16.1512 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.94694 | 1.5941 | 1.39964 | 1.71061 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.02711 | 1.47677 | 1.18172 | 3.20007 |
CDS Structure of MLOC_4582
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4582.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g22680.1 |
-2 |
6e-174 |
499 |
221/261 (85%) |
13103.m02731 protein RING finger and CHY zinc finger domain-containing protein 1, putative, expressed |
| TAIR PP10 |
AT5G18650.1 |
-2 |
3e-123 |
369 |
161/257 (63%) |
CHY-type/CTCHY-type/RING-type Zinc finger protein | chr5:6218260-6220374 FORWARD LENGTH=267 |
