MLOC_45769 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.0927323.011122.3660
LEAShoots from the seedlings (10 cm shoot stage)33.822725.405219.88380
INF1Young developing inflorescences (5mm)38.389529.477529.95860
INF2Developing inflorescences (1-1.5 cm)45.25345.150537.49260
ROORoots from the seedlings (10 cm shoot stage)8.5073823.556214.65750
NODDeveloping tillers at six leaf stage, 3rd internode12.169115.894211.81010
CAR5Developing grain, bracts removed (5 DPA)43.347938.721941.98170
CAR15Developing grain, bracts removed (15 DPA)14.398110.98614.62050



CDS Structure of MLOC_45769






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK362832
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362832CUST_20613_PI427708080NoneNoneNone
MLOC_19189.1NoneAvailableNonecontig_1583848 (Not mapped)
MLOC_27626.1NoneAvailableNonecontig_184867 (Mapped)
MLOC_42220.1NoneAvailableNonecontig_2631864 (Not mapped)
MLOC_45612.1NoneAvailableNonecontig_27942 (Not mapped)
MLOC_45769.1NoneAvailableNonecontig_281012 (Mapped)
MLOC_47534.1NoneAvailableNonecontig_307661 (Mapped)
MLOC_48461.1NoneAvailableNonecontig_324121 (Not mapped)
MLOC_54215.1NoneAvailableNonecontig_389711 (Not mapped)
MLOC_60837.1NoneAvailableNonecontig_44829 (Mapped)
MLOC_6456.1NoneAvailableNonecontig_137580 (Mapped)
MLOC_79380.1NoneAvailableAvailablecontig_8475 (Mapped)
MLOC_8701.1NoneAvailableNonecontig_145505 (Mapped)
MLOC_873.1NoneAvailableNonecontig_1071084 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----