- Predicted Gene MLOC_45739
MLOC_45739 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 4.69075 | 6.63982 | 8.0038 | 6.25861 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 12.1963 | 5.74894 | 6.9981 | 6.9778 |
INF1 | Young developing inflorescences (5mm) | 18.5895 | 21.1489 | 27.5704 | 17.9958 |
INF2 | Developing inflorescences (1-1.5 cm) | 28.2705 | 31.0179 | 31.0128 | 32.0759 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.20286 | 7.91257 | 8.42853 | 8.13248 |
NOD | Developing tillers at six leaf stage, 3rd internode | 9.39386 | 10.9764 | 8.64983 | 33.6312 |
CAR5 | Developing grain, bracts removed (5 DPA) | 19.2676 | 20.5481 | 17.9461 | 18.4303 |
CAR15 | Developing grain, bracts removed (15 DPA) | 10.215 | 8.19832 | 10.8358 | 21.9937 |
CDS Structure of MLOC_45739
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_45739.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g67100.1 |
+2 |
1e-62 |
221 |
121/174 (70%) |
13101.m07275 protein expressed protein |
TAIR PP10 |
AT1G65470.2 |
+2 |
2e-29 |
122 |
74/151 (49%) |
| Symbols: FAS1 | chromatin assembly factor-1 (FASCIATA1) (FAS1) | chr1:24319906-24323879 REVERSE LENGTH=807 |