MLOC_4563 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.26002 | 6.46494 | 5.05118 | 7.07483 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 4.01784 | 0.441966 | 0.855843 | 1.62685 |
| INF1 | Young developing inflorescences (5mm) | 13.9114 | 11.4761 | 9.63291 | 11.5667 |
| INF2 | Developing inflorescences (1-1.5 cm) | 9.05134 | 14.7264 | 10.2405 | 16.0631 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.0431 | 3.03956 | 2.97567 | 4.70768 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.047365 | 0.0241187 | 0.0105792 | 0.0908115 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 4.93677 | 5.3791 | 5.50207 | 6.55916 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.198154 | 0.115049 | 0.413869 | 0.585753 |
CDS Structure of MLOC_4563
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4563.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g08150.1 |
-2 |
0.0 |
1061 |
622/851 (73%) |
13101.m00843 protein expressed protein |
| TAIR PP10 |
AT3G15550.1 |
-2 |
1e-153 |
476 |
274/548 (50%) |
unknown protein; Has 25732 Blast hits to 16979 proteins in 961 species: Archae - 144; Bacteria - 1801; Metazoa - 12681; Fungi - 1868; Plants - 912; Viruses - 94; Other Eukaryotes - 8232 (source: NCBI BLink). | chr3:5267351-5270095 FORWARD LENGTH=729 |
