MLOC_4560 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains21.336418.471721.1817.2464
LEAShoots from the seedlings (10 cm shoot stage)14.991417.718.729512.8634
INF1Young developing inflorescences (5mm)36.336844.239146.34728.0659
INF2Developing inflorescences (1-1.5 cm)25.542730.100230.225326.09
ROORoots from the seedlings (10 cm shoot stage)9.673218.330417.099816.9048
NODDeveloping tillers at six leaf stage, 3rd internode8.311078.7910219.045331.3019
CAR5Developing grain, bracts removed (5 DPA)12.663414.066114.277710.7009
CAR15Developing grain, bracts removed (15 DPA)6.106224.664845.09849.9993



CDS Structure of MLOC_4560






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK251945.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251945.1CUST_19090_PI427708080NoneNoneNone
MLOC_4560.1NoneAvailableAvailablecontig_135266 (Mapped)
MLOC_75072.1NoneAvailableNonecontig_67077 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----