MLOC_45579 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.652220.2061471.363380.856986
LEAShoots from the seedlings (10 cm shoot stage)0.310203000.287931
INF1Young developing inflorescences (5mm)0.9012810.1745360.3935940.436146
INF2Developing inflorescences (1-1.5 cm)0.4742880.15330800.421015
ROORoots from the seedlings (10 cm shoot stage)1.76140.9624911.075381.25791
NODDeveloping tillers at six leaf stage, 3rd internode0.2669510.18773800.563055
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_45579






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_45579.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_45579.2CUST_6404_PI427708083AvailableAvailablecontig_279179 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g36924.1 -3 4e-38 96 46/50 (92%) 13110.m03350 protein aquaporin protein, putative, expressed
TAIR PP10 AT4G10380.1 -3 2e-29 88 41/50 (82%) | Symbols: NIP5;1, NLM6, NLM8 | NOD26-like intrinsic protein 5;1 | chr4:6431530-6434510 REVERSE LENGTH=304