MLOC_45557 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.905552.112813.127232.32644
LEAShoots from the seedlings (10 cm shoot stage)3.819623.884954.083353.49034
INF1Young developing inflorescences (5mm)4.319995.677377.08764.70481
INF2Developing inflorescences (1-1.5 cm)5.961046.476736.73116.75034
ROORoots from the seedlings (10 cm shoot stage)1.670682.527682.100332.89301
NODDeveloping tillers at six leaf stage, 3rd internode2.89893.189043.0250210.3182
CAR5Developing grain, bracts removed (5 DPA)4.89694.325214.355374.18748
CAR15Developing grain, bracts removed (15 DPA)2.495071.918061.869214.8591



CDS Structure of MLOC_45557






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_45557.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_45557.1CUST_6402_PI427708083AvailableAvailablecontig_279055 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g56869.1 -2 2e-11 66 31/43 (72%) 13103.m06218 protein ribose-5-phosphate isomerase A, putative, expressed
TAIR PP10None-----