MLOC_4555 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_4555_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_4555_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 27.5488 | 60.7836 | 51.2095 | 52.5988 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 31.4266 | 13.622 | 8.78533 | 16.7954 |
INF1 | Young developing inflorescences (5mm) | 216.963 | 190.011 | 180.835 | 166.811 |
INF2 | Developing inflorescences (1-1.5 cm) | 225.507 | 264.821 | 222.331 | 276.011 |
ROO | Roots from the seedlings (10 cm shoot stage) | 10.7824 | 26.1614 | 24.3802 | 32.7463 |
NOD | Developing tillers at six leaf stage, 3rd internode | 9.51478 | 12.5568 | 7.28865 | 44.4947 |
CAR5 | Developing grain, bracts removed (5 DPA) | 87.2842 | 79.0727 | 83.3003 | 84.9628 |
CAR15 | Developing grain, bracts removed (15 DPA) | 15.3462 | 13.1726 | 12.9289 | 31.7918 |
CDS Structure of MLOC_4555
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4555.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g27040.1 |
-1 |
0.0 |
1514 |
775/940 (82%) |
13101.m02812 protein chromatin-remodeling complex ATPase chain, putative, expressed |
TAIR PP10 |
AT3G06400.1 |
-1 |
0.0 |
1423 |
713/842 (85%) |
| Symbols: CHR11 | chromatin-remodeling protein 11 | chr3:1941066-1946700 FORWARD LENGTH=1055 |