MLOC_4555 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains27.548860.783651.209552.5988
LEAShoots from the seedlings (10 cm shoot stage)31.426613.6228.7853316.7954
INF1Young developing inflorescences (5mm)216.963190.011180.835166.811
INF2Developing inflorescences (1-1.5 cm)225.507264.821222.331276.011
ROORoots from the seedlings (10 cm shoot stage)10.782426.161424.380232.7463
NODDeveloping tillers at six leaf stage, 3rd internode9.5147812.55687.2886544.4947
CAR5Developing grain, bracts removed (5 DPA)87.284279.072783.300384.9628
CAR15Developing grain, bracts removed (15 DPA)15.346213.172612.928931.7918



CDS Structure of MLOC_4555






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_4555.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_4555.1CUST_12329_PI427708080AvailableAvailablecontig_135263 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g27040.1 -1 0.0 1514 775/940 (82%) 13101.m02812 protein chromatin-remodeling complex ATPase chain, putative, expressed
TAIR PP10 AT3G06400.1 -1 0.0 1423 713/842 (85%) | Symbols: CHR11 | chromatin-remodeling protein 11 | chr3:1941066-1946700 FORWARD LENGTH=1055