MLOC_45547 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.066113.139311.52740
LEAShoots from the seedlings (10 cm shoot stage)9.121096.353685.948190
INF1Young developing inflorescences (5mm)23.425722.563228.53650
INF2Developing inflorescences (1-1.5 cm)25.641424.050124.19330
ROORoots from the seedlings (10 cm shoot stage)7.4324310.994610.29670
NODDeveloping tillers at six leaf stage, 3rd internode5.438685.96495.691080
CAR5Developing grain, bracts removed (5 DPA)11.844713.588716.78890
CAR15Developing grain, bracts removed (15 DPA)3.455684.068793.582060



CDS Structure of MLOC_45547






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK354297
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354297CUST_19352_PI427708080NoneNoneNone
MLOC_11591.1NoneAvailableAvailablecontig_1561410 (Mapped)
MLOC_45547.3NoneAvailableNonecontig_279005 (Mapped)
MLOC_50747.1NoneAvailableNonecontig_36576 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----