MLOC_45467 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.739217.294318.51916.2283
LEAShoots from the seedlings (10 cm shoot stage)523.83345.6392107.113192.002
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.2046920.2910930.2556920.288141
ROORoots from the seedlings (10 cm shoot stage)1.009930.1467531.851580.535987
NODDeveloping tillers at six leaf stage, 3rd internode456.633184.5320.0644341428.294
CAR5Developing grain, bracts removed (5 DPA)44.344327.632538.183434.3972
CAR15Developing grain, bracts removed (15 DPA)17.79069.9945517.547334.6732



CDS Structure of MLOC_45467






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_45467.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_45467.1CUST_6388_PI427708083AvailableAvailablecontig_278218 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g05970.1 +1 5e-41 140 66/85 (78%) 13110.m00516 protein POEI12 - Pollen Ole e I allergen and extensin family protein precursor, expressed
TAIR PP10None-----