MLOC_4544 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.100258 | 0.0648641 | 0.157309 | 0.119988 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.185917 | 0 | 0.0362755 | 0.109046 |
| INF1 | Young developing inflorescences (5mm) | 0.0582905 | 0.0211909 | 0 | 0.0388825 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0.0175085 | 0 | 0.0325553 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 13.875 | 46.4154 | 10.9812 | 53.0911 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0172652 | 0.0291189 | 0.0325768 | 0.106364 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0.0203465 | 0.0464214 | 0.0519866 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.613034 | 0.366001 | 0.349405 | 1.16992 |
CDS Structure of MLOC_4544
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4544.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g36320.3 |
+2 |
0.0 |
808 |
400/498 (80%) |
13108.m03813 protein decarboxylase, putative, expressed |
| TAIR PP10 |
AT5G17330.1 |
+2 |
0.0 |
747 |
370/504 (73%) |
| Symbols: GAD, GAD1 | glutamate decarboxylase | chr5:5711141-5714839 FORWARD LENGTH=502 |
