MLOC_45372 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.627717.997118.091215.7934
LEAShoots from the seedlings (10 cm shoot stage)46.608433.507145.614335.8245
INF1Young developing inflorescences (5mm)10.03325.82015.979965.8048
INF2Developing inflorescences (1-1.5 cm)2.714144.405684.71654.08172
ROORoots from the seedlings (10 cm shoot stage)0.818023.57555.442983.79366
NODDeveloping tillers at six leaf stage, 3rd internode22.288719.035944.418974.4112
CAR5Developing grain, bracts removed (5 DPA)4.156313.276554.382853.52224
CAR15Developing grain, bracts removed (15 DPA)0.09373210.2903470.2783110.472091



CDS Structure of MLOC_45372






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_45372.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_45372.1CUST_6372_PI427708083AvailableAvailablecontig_277574 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g29220.1 -2 3e-123 363 200/227 (88%) 13107.m02929 protein Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed
TAIR PP10 AT3G23470.1 -2 4e-94 287 148/227 (65%) Cyclopropane-fatty-acyl-phospholipid synthase | chr3:8415565-8418120 FORWARD LENGTH=461