- Predicted Gene MLOC_45350
MLOC_45350 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 52.8782 | 45.1474 | 37.6774 | 59.0959 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 28.9495 | 1.52497 | 5.00696 | 11.0971 |
INF1 | Young developing inflorescences (5mm) | 172.382 | 187.598 | 189.929 | 190.296 |
INF2 | Developing inflorescences (1-1.5 cm) | 172.859 | 231.627 | 169.772 | 272.916 |
ROO | Roots from the seedlings (10 cm shoot stage) | 14.5001 | 27.5103 | 23.4282 | 45.5852 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.466931 | 0.768245 | 0.404822 | 3.11257 |
CAR5 | Developing grain, bracts removed (5 DPA) | 45.8703 | 47.1103 | 39.758 | 56.1488 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.99766 | 2.15224 | 4.37219 | 9.20506 |
CDS Structure of MLOC_45350
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_45350.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g47150.1 |
-2 |
9e-37 |
142 |
115/191 (60%) |
13102.m05304 protein DNA topoisomerase 2, putative, expressed |
TAIR PP10 | None | - | - | - | - | - |