MLOC_45350 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains52.878245.147437.677459.0959
LEAShoots from the seedlings (10 cm shoot stage)28.94951.524975.0069611.0971
INF1Young developing inflorescences (5mm)172.382187.598189.929190.296
INF2Developing inflorescences (1-1.5 cm)172.859231.627169.772272.916
ROORoots from the seedlings (10 cm shoot stage)14.500127.510323.428245.5852
NODDeveloping tillers at six leaf stage, 3rd internode0.4669310.7682450.4048223.11257
CAR5Developing grain, bracts removed (5 DPA)45.870347.110339.75856.1488
CAR15Developing grain, bracts removed (15 DPA)3.997662.152244.372199.20506



CDS Structure of MLOC_45350






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_45350.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK248793.1NoneNoneNoneNone
MLOC_45350.2CUST_238_PI427708083AvailableAvailablecontig_277404 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g47150.1 -2 9e-37 142 115/191 (60%) 13102.m05304 protein DNA topoisomerase 2, putative, expressed
TAIR PP10None-----