MLOC_4531 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_4531_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_4531_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 72.4533 | 60.5429 | 62.9181 | 63.381 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 33.2967 | 4.64128 | 8.53118 | 11.9996 |
INF1 | Young developing inflorescences (5mm) | 29.7961 | 16.1193 | 16.6318 | 18.5276 |
INF2 | Developing inflorescences (1-1.5 cm) | 13.2196 | 20.7153 | 18.7574 | 20.5122 |
ROO | Roots from the seedlings (10 cm shoot stage) | 21.6595 | 21.6283 | 23.3776 | 23.0947 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.03553 | 1.47515 | 0.0379809 | 2.36699 |
CAR5 | Developing grain, bracts removed (5 DPA) | 11.8606 | 13.4372 | 8.14158 | 11.6217 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.48923 | 0.234143 | 0.424161 | 0.977058 |
CDS Structure of MLOC_4531
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_4531.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g17760.1 |
-2 |
5e-98 |
302 |
238/315 (76%) |
13103.m02123 protein RNA recognition motif containing protein, putative, expressed |
TAIR PP10 |
AT1G22910.2 |
-2 |
5e-33 |
126 |
66/84 (79%) |
RNA-binding (RRM/RBD/RNP motifs) family protein | chr1:8105808-8107618 FORWARD LENGTH=242 |