MLOC_45280 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0.02298530.03878270.1141230.142664
CAR5Developing grain, bracts removed (5 DPA)1.261691.105781.097181.21396
CAR15Developing grain, bracts removed (15 DPA)0.1414360.08709870.1675290.466197



CDS Structure of MLOC_45280






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_45280.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_45280.1CUST_6354_PI427708083AvailableAvailablecontig_277097 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g73220.1 -2 2e-122 210 102/139 (73%) 13101.m07991 protein peroxidase precursor, putative, expressed
TAIR PP10 AT1G71695.1 -2 3e-81 145 75/131 (57%) Peroxidase superfamily protein | chr1:26964359-26966557 FORWARD LENGTH=358