- Predicted Gene MLOC_45268
MLOC_45268 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.09895 | 4.18566 | 4.61741 | 4.11719 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.59982 | 5.11331 | 3.69195 | 2.9883 |
| INF1 | Young developing inflorescences (5mm) | 13.1212 | 15.1738 | 17.617 | 12.2193 |
| INF2 | Developing inflorescences (1-1.5 cm) | 24.324 | 21.8197 | 17.251 | 22.7742 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.71781 | 1.81089 | 2.06969 | 2.4159 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.929644 | 0.771827 | 1.6363 | 3.16124 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.03164 | 5.66526 | 6.29009 | 5.38744 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.57496 | 4.69481 | 4.62054 | 9.28696 |
CDS Structure of MLOC_45268
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_45268.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g58090.1 |
-1 |
3e-62 |
204 |
101/126 (80%) |
13102.m06725 protein PSP domain containing protein, expressed |
| TAIR PP10 |
AT4G21660.1 |
-1 |
7e-59 |
194 |
97/126 (77%) |
proline-rich spliceosome-associated (PSP) family protein | chr4:11506259-11509772 REVERSE LENGTH=584 |