MLOC_45238 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.171831.978364.59573.0491
LEAShoots from the seedlings (10 cm shoot stage)0.23327400.2063350.242507
INF1Young developing inflorescences (5mm)0.1283750.2595300.223609
INF2Developing inflorescences (1-1.5 cm)0.3674090.214460.3131190.36549
ROORoots from the seedlings (10 cm shoot stage)0.4998410.4328660.4259320.723852
NODDeveloping tillers at six leaf stage, 3rd internode0.10276400.1561460.18818
CAR5Developing grain, bracts removed (5 DPA)0.5920260.93084700.960736
CAR15Developing grain, bracts removed (15 DPA)2001.593102.822432.126949.94



CDS Structure of MLOC_45238






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_45238.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_45238.1CUST_6346_PI427708083AvailableAvailablecontig_276868 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g25090.2 +3 3e-18 77 36/60 (60%) 13112.m02544 protein expressed protein
TAIR PP10None-----