MLOC_45226 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains12.009310.290510.057612.6055
LEAShoots from the seedlings (10 cm shoot stage)5.577761.235921.419242.50991
INF1Young developing inflorescences (5mm)31.691232.201126.939630.2161
INF2Developing inflorescences (1-1.5 cm)25.170932.794628.814938.4808
ROORoots from the seedlings (10 cm shoot stage)8.2007810.83228.3303315.634
NODDeveloping tillers at six leaf stage, 3rd internode0.7590111.091720.5618033.89902
CAR5Developing grain, bracts removed (5 DPA)21.905720.518222.133625.1969
CAR15Developing grain, bracts removed (15 DPA)2.779162.195012.149816.49207



CDS Structure of MLOC_45226






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_45226.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_45226.1CUST_12303_PI427708080AvailableAvailablecontig_276823 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g08190.1 -1 0.0 978 513/610 (84%) 13102.m00944 protein CYPRO4, putative, expressed
TAIR PP10 AT4G33400.1 -1 0.0 699 365/615 (59%) Vacuolar import/degradation, Vid27-related protein | chr4:16078189-16080410 REVERSE LENGTH=645