- Predicted Gene MLOC_45201
MLOC_45201 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.76819 | 2.63172 | 2.26284 | 1.63349 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.7501 | 2.02467 | 1.69804 | 1.13239 |
| INF1 | Young developing inflorescences (5mm) | 5.73199 | 6.05549 | 6.38156 | 3.52715 |
| INF2 | Developing inflorescences (1-1.5 cm) | 9.02951 | 7.08378 | 5.77561 | 6.28168 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.07848 | 2.00533 | 1.86837 | 1.44919 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.566589 | 1.02858 | 1.53686 | 2.60138 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 3.5438 | 3.28768 | 3.84363 | 2.43264 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.940221 | 0.958744 | 1.10905 | 1.49604 |
CDS Structure of MLOC_45201
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_45201.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g29360.1 |
+3 |
7e-37 |
151 |
72/76 (95%) |
13107.m02945 protein tetratricopeptide repeat domain containing protein, expressed |
| TAIR PP10 |
AT2G06210.1 |
+3 |
5e-29 |
125 |
57/76 (75%) |
| Symbols: ELF8, VIP6 | binding | chr2:2429108-2436588 REVERSE LENGTH=1091 |