- Predicted Gene MLOC_45193
MLOC_45193 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.350054 | 1.19487 | 1.42834 | 1.08372 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 66.682 | 87.8272 | 73.246 | 60.0493 |
| INF1 | Young developing inflorescences (5mm) | 1.50629 | 0.843234 | 0.498892 | 0.851551 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.23799 | 1.25027 | 1.618 | 1.60579 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.408411 | 1.70621 | 0.961509 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 143.928 | 57.4728 | 100.297 | 165.038 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 22.9797 | 25.6576 | 24.9659 | 26.4085 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.85806 | 2.50064 | 1.58067 | 5.2805 |
CDS Structure of MLOC_45193
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_45193.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g49870.2 |
+2 |
3e-61 |
194 |
108/126 (86%) |
13102.m05663 protein expressed protein |
| TAIR PP10 |
AT4G01150.1 |
+2 |
4e-47 |
157 |
73/91 (80%) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in 59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | chr4:493692-494668 FORWARD LENGTH=164 |